Clinical Trial: Cutaneous Mastocytosis in Children: Analysis of Somatic and Germline Mutations
Study Status: Recruiting
Recruit Status: Recruiting
Study Type: Observational
Official Title: Cutaneous Mastocytosis in Children: Analysis of Somatic and Germline Mutations
Brief Summary: Pediatric mastocytosis is an orphan disease, which encompasses several clinically distinct entities including solitary mastocytoma, urticaria pigmentosa, diffuse cutaneous mastocytosis and the newly recognized mast cell activation syndrome. The most common form of pediatric mastocytosis is cutaneous maculopapular mastocytosis (CMPM), also known as urticaria pigmentosa (UP). There are significant knowledge gaps regarding the genetic basis of pediatric mastocytosis and the functional activity of mast cells in this condition. The Pediatric Dermatology and Pediatric Oncology services at the University of Minnesota Masonic Children's Hospital are seeing significant growth in clinical volumes of pediatric mastocytosis, including rare, familial cases. The aims of this study are to prospectively explore germline risk for UP and to perform a mutational analysis to identify somatic mutations, beyond those currently identified, in pediatric patients with UP.
Detailed Summary:
Urticaria pigmentosa (UP) is a relatively common disorder in pediatric patients, and little is known regarding the somatic and germline genetic variants associated with the disease. The University of Minnesota Masonic Children's Hospital is a regional referral center for pediatric patients with mast cell disorders. Collaborators on this study include several University departments including: Pediatric Dermatology, Pediatric Oncology, the Biomedical Genomics program, Lab Medicine and Pathology department. We hypothesize that because of differences observed in the clinical behavior of pediatric- and adult-onset mast cell disease, specifically UP, we will identify novel somatic gene variants in addition to c-KIT . We further hypothesize that we will observe novel germline genetic variants in pediatric UP distinct from what has previously been described in adults.
Specific Aims include the following:
Specific Aim 1: RNA Sequencing for Gene Expression and Mutation Analysis. Utilizing RNA sequencing (RNA-Seq), we will perform paired lesional and peripheral blood sequencing in UP cases to identify variation in gene expression and define novel somatic mutations associated with pediatric UP.
Specific Aim 2: Exploration of Germline Risk. Utilizing single nucleotide polymorphism (SNP) array, we will perform linkage analysis in UP cases and their unaffected family members to identify germline genetic variants associated with UP.
- Discordant sibling analysis: Children with UP and their unaffected siblings will be compared to identify germline variants.
- Identical twin and parent analysis: Identical infant twins with a severe UP phenotype will be compared with their unaffect
Sponsor: University of Minnesota - Clinical and Translational Science Institute
Current Primary Outcome: RNA sequencing [ Time Frame: 1.5 years ]
Fresh tissue from lesional skin will be obtained for gene expression and mutational analysis
Original Primary Outcome: Same as current
Current Secondary Outcome: SNP microarray analysis [ Time Frame: 1.5 years ]
SNP microarray analysis will be performed on DNA obtained from buccal swabs or whole blood samples. Samples from patients and unaffected family members will be compared.
Original Secondary Outcome: Same as current
Information By: University of Minnesota - Clinical and Translational Science Institute
Dates:
Date Received: March 15, 2016
Date Started: November 2016
Date Completion: December 2018
Last Updated: March 13, 2017
Last Verified: March 2017
